This Is AuburnElectronic Theses and Dissertations

Browsing by Author "Bhattacharya, Debswapna"

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Computational Methods for Evaluation of Protein Structural Models 

Alapati, Rahul (2019-04-23)
Proteins are essential parts of organisms and participate in virtually every process within the cells. The function of a protein is closely related to its structure than to its amino acid sequence. Hence, the study of the ...

An experimental investigation of semi-automatic generation of concept maps from textbooks 

Nayak, Vineet (2019-07-18)
A concept map is a useful tool to organize and structure unstructured data, in this case, the information contained in a textbook. In education, a concept map can be used to set learning goals, monitor progress and visualize ...

New computational and data-driven methods for protein homology modeling 

Bhattacharya, Sutanu (2021-07-14)
Threading a query protein sequence onto a library of weakly homologous structural templates remains challenging. In light of the recent advancements in residue-residue contact prediction technologies powered by sequence ...

Novel Machine Learning Algorithms for Analyzing Large-scale Genomic and Genetic Data 

Wang, Ye (2020-12-01)
With the advancement of next-generation sequencing technology, numerous disease/ phenotypic associations with the human microbiome and human genome are uncovered and revealed. In this dissertation, we take advantage of ...